| Round | Overall | Player |
|---|---|---|
| 1 | 6th | SS Troy Tulowitzki Col |
| 2 | 19th | OF Giancarlo Stanton Mia |
| 3 | 30th | OF Yoenis Cespedes Oak |
| 4 | 43rd | OF Allen Craig StL |
| 5 | 54th | C Matt Wieters Bal |
| 6 | 67th | 3B Will Middlebrooks Bos |
| 7 | 78th | 2B Neil Walker Pit |
| 8 | 91st | SP Ryan Vogelsong SF |
| 9 | 102nd | RP Jason Motte StL |
| 10 | 115th | RP Jim Johnson Oak |
| 11 | 126th | 3B Pedro Alvarez Pit |
| 12 | 139th | OF Nick Markakis Bal |
| 13 | 150th | SP C.J. Wilson LAA |
| 14 | 163rd | SP Brandon Morrow Tor |
| 15 | 174th | 1B Justin Morneau Col |
| 16 | 187th | OF Dayan Viciedo ChA |
| 17 | 198th | SP Paul Maholm Atl |
| 18 | 211th | C Alex Avila Det |
| 19 | 222nd | SP Lance Lynn StL |
| 20 | 235th | SS Andrelton Simmons Atl |
| 21 | 246th | 2B Omar Infante Det |
| 22 | 259th | OF Tyler Colvin Col |
| 23 | 270th | OF Michael Brantley Cle |
| 24 | 283rd | 1B Garrett Jones Mia |
| 25 | 294th | SP Trevor Bauer Cle |
| 26 | 307th | 3B Nolan Arenado Col |
| 27 | 318th | SP Felix Doubront Bos |
| 28 | 331st | SP Joe Blanton LAA |
| 29 | 342nd | RP David Phelps NYA |