| Round | Overall | Player |
|---|---|---|
| 1 | 6th | 1B Frank Thomas ChA |
| 2 | 19th | DH Juan Gonzalez Tex |
| 3 | 30th | 1B Jim Thome Cle |
| 4 | 43rd | 3B Scott Rolen Phi |
| 5 | 54th | P Curt Schilling Phi |
| 6 | 67th | P Tom Glavine Atl |
| 7 | 78th | 2B Delino DeShields StL |
| 8 | 91st | P Shawn Estes SF |
| 9 | 102nd | OF Andruw Jones Atl |
| 10 | 115th | SS Royce Clayton StL |
| 11 | 126th | P Billy Wagner Hou |
| 12 | 139th | OF Mike Cameron ChA |
| 13 | 150th | P Jaret Wright Cle |
| 14 | 163rd | P Ramon Martinez LA |
| 15 | 174th | OF Reggie Sanders Cin |
| 16 | 187th | P Brett Tomko Cin |
| 17 | 198th | P Francisco Cordova Pit |
| 18 | 211th | C Jim Leyritz Bos |
| 19 | 222nd | C Darrin Fletcher Tor |
| 20 | 235th | 3B Todd Walker Min |
| 21 | 246th | DH Jose Canseco Tor |
| 22 | 259th | P Tom Gordon Bos |
| 23 | 270th | 1B Travis Lee Ari |
| 24 | 283rd | P Oscar Henriquez Fla |
| 25 | 294th | P Orel Hershiser SF |
| 26 | 307th | 3B Sean Berry Hou |