| Round | Overall | Player |
|---|---|---|
| 1 | 7th | OF Larry Walker Col |
| 2 | 18th | OF Kenny Lofton Cle |
| 3 | 31st | P Randy Johnson Sea |
| 4 | 42nd | OF Ellis Burks Col |
| 5 | 55th | 1B Darin Erstad Ana |
| 6 | 66th | P Mark Wohlers Atl |
| 7 | 79th | C Todd Greene Ana |
| 8 | 90th | OF Al Martin Pit |
| 9 | 103rd | P Brad Radke Min |
| 10 | 114th | 3B Willie Greene Cin |
| 11 | 127th | SS Royce Clayton StL |
| 12 | 138th | P Livan Hernandez Fla |
| 13 | 151st | P Jeff Brantley StL |
| 14 | 162nd | 2B Quilvio Veras SD |
| 15 | 175th | P Mike Fetters Oak |
| 16 | 186th | OF Derek Bell Hou |
| 17 | 199th | 1B John Olerud NYN |
| 18 | 210th | P Rick Aguilera Min |
| 19 | 223rd | 3B Fernando Tatis Tex |
| 20 | 234th | C John Flaherty TB |
| 21 | 247th | P Ben McDonald Cle |
| 22 | 258th | OF Jeffrey Hammonds Bal |
| 23 | 271st | OF Brian S. Giles Cle |
| 24 | 282nd | P Ramiro Mendoza NYA |
| 25 | 295th | 1B Travis Lee Ari |
| 26 | 306th | OF Mark Kotsay Fla |