| Round | Overall | Player |
|---|---|---|
| 1 | 8th | SS Nomar Garciaparra Bos |
| 2 | 17th | 2B Craig Biggio Hou |
| 3 | 32nd | OF Tim Salmon Ana |
| 4 | 41st | 3B Scott Rolen Phi |
| 5 | 56th | 1B Tony Clark Det |
| 6 | 65th | OF David Justice Cle |
| 7 | 80th | P Ismael Valdez LA |
| 8 | 89th | P Justin Thompson Det |
| 9 | 104th | OF Brian Jordan StL |
| 10 | 113th | P Charles Nagy Cle |
| 11 | 128th | P Jose Mesa Cle |
| 12 | 137th | OF Marquis Grissom Mil |
| 13 | 152nd | C Jason Kendall Pit |
| 14 | 161st | P Jimmy Key Bal |
| 15 | 176th | 1B Paul Sorrento TB |
| 16 | 185th | P Kirk Rueter SF |
| 17 | 200th | OF Matt Stairs Oak |
| 18 | 209th | 3B Fernando Tatis Tex |
| 19 | 224th | P Jaime Navarro ChA |
| 20 | 233rd | P Bartolo Colon Cle |
| 21 | 248th | P Mark Portugal Phi |
| 22 | 257th | C Jorge Fabregas Ari |
| 23 | 272nd | 2B Mickey Morandini ChN |
| 24 | 281st | OF Gregg Jefferies Phi |
| 25 | 296th | P Orel Hershiser SF |
| 26 | 305th | 3B Joe Randa Det |
| 27 | 320th | SS Desi Relaford Phi |