| Round | Overall | Player |
|---|---|---|
| 1 | 5th | 1B Jeff Bagwell Hou |
| 2 | 20th | OF Sammy Sosa ChN |
| 3 | 29th | OF Raul Mondesi LA |
| 4 | 44th | C Ivan Rodriguez Tex |
| 5 | 53rd | SS Barry Larkin Cin |
| 6 | 68th | OF Vladimir Guerrero Mon |
| 7 | 77th | 2B Eric Young LA |
| 8 | 92nd | 1B Darin Erstad Ana |
| 9 | 101st | 1B Eric Karros LA |
| 10 | 116th | OF Al Martin Pit |
| 11 | 125th | 3B Todd Zeile LA |
| 12 | 140th | P John Franco NYN |
| 13 | 149th | P Antonio Osuna LA |
| 14 | 164th | P Jeff Brantley StL |
| 15 | 173rd | P Doug Jones Mil |
| 16 | 188th | OF Magglio Ordonez ChA |
| 17 | 197th | P Jerry Dipoto Col |
| 18 | 212th | P Jay Powell Fla |
| 19 | 221st | P Brian Rose Bos |
| 20 | 236th | P Tim Wakefield Bos |
| 21 | 245th | P Brian Anderson Ari |
| 22 | 260th | 1B Wally Joyner SD |
| 23 | 269th | 1B Brad Fullmer Mon |
| 24 | 284th | 3B Kevin Orie ChN |
| 25 | 293rd | P Jeff Suppan Ari |
| 26 | 308th | C Eli Marrero StL |
| 27 | 317th | SS Chris Gomez SD |