| Round | Overall | Player |
|---|---|---|
| 1 | 10th | 3B Chipper Jones Atl |
| 2 | 15th | P Greg Maddux Atl |
| 3 | 34th | 1B Andres Galarraga Atl |
| 4 | 39th | C Jason Kendall Pit |
| 5 | 58th | OF Brian L. Hunter Det |
| 6 | 63rd | P Tom Glavine Atl |
| 7 | 82nd | SS Mark Grudzielanek Mon |
| 8 | 87th | OF Ben Grieve Oak |
| 9 | 106th | P Jeff Brantley StL |
| 10 | 111th | OF Steve Finley SD |
| 11 | 130th | 2B Quilvio Veras SD |
| 12 | 135th | P Scott Erickson Bal |
| 13 | 154th | P John Rocker Atl |
| 14 | 159th | P Mark Clark ChN |
| 15 | 178th | OF Mike Cameron ChA |
| 16 | 183rd | 3B Edgardo Alfonzo NYN |
| 17 | 202nd | 1B Paul Sorrento TB |
| 18 | 207th | P Darren Oliver Tex |
| 19 | 226th | P Victor Santos Det |
| 20 | 231st | OF Quinton McCracken TB |
| 21 | 250th | P Willie Blair Ari |
| 22 | 255th | OF Richard Hidalgo Hou |
| 23 | 274th | P Terry Adams ChN |
| 24 | 279th | P Brian Moehler Det |
| 25 | 298th | P Bobby Witt Tex |
| 26 | 303rd | OF B.J. Surhoff Bal |
| 27 | 322nd | OF Ruben Sierra ChA |