| Round | Overall | Player |
|---|---|---|
| 1 | 2nd | C Mike Piazza LA |
| 2 | 23rd | 3B Vinny Castilla Col |
| 3 | 26th | P Kevin Brown SD |
| 4 | 47th | 1B Tony Clark Det |
| 5 | 50th | P Mark Wohlers Atl |
| 6 | 71st | OF Tony Gwynn SD |
| 7 | 74th | P Denny Neagle Atl |
| 8 | 95th | P Roberto Hernandez TB |
| 9 | 98th | P Hideo Nomo LA |
| 10 | 119th | OF Jeromy Burnitz Mil |
| 11 | 122nd | 2B Delino DeShields StL |
| 12 | 143rd | P Rich Loiselle Pit |
| 13 | 146th | OF Andruw Jones Atl |
| 14 | 167th | 1B Brad Fullmer Mon |
| 15 | 170th | OF Henry Rodriguez ChN |
| 16 | 191st | DH Reggie Jefferson Bos |
| 17 | 194th | OF Butch Huskey NYN |
| 18 | 215th | 2B Scott Spiezio Oak |
| 19 | 218th | 3B Willie Greene Cin |
| 20 | 239th | 2B Jose Ortiz Oak |
| 21 | 242nd | SS Walt Weiss Atl |
| 22 | 263rd | P Dennis Eckersley Bos |
| 23 | 266th | OF Jeffrey Hammonds Bal |
| 24 | 287th | P Hideki Irabu NYA |
| 25 | 290th | OF Chris Stynes Cin |
| 26 | 311th | C Mike Sweeney KC |
| 27 | 314th | OF Johnny Damon KC |