| Round | Overall | Player |
|---|---|---|
| 1 | 6th | OF Barry Bonds SF |
| 2 | 19th | OF Albert Belle ChA |
| 3 | 30th | P Andy Pettitte NYA |
| 4 | 43rd | 3B Travis Fryman Cle |
| 5 | 54th | P Ismael Valdez LA |
| 6 | 67th | C Jeff Reed Col |
| 7 | 78th | SS Omar Vizquel Cle |
| 8 | 91st | P Jeff Shaw Cin |
| 9 | 102nd | 1B David Segui Sea |
| 10 | 115th | P Jamie Moyer Sea |
| 11 | 126th | P Jeff Fassero Sea |
| 12 | 139th | P Chuck Finley Ana |
| 13 | 150th | OF Reggie Sanders Cin |
| 14 | 163rd | 1B Eric Karros LA |
| 15 | 174th | P Mike Hampton Hou |
| 16 | 187th | P Darren Dreifort LA |
| 17 | 198th | P Alan Benes StL |
| 18 | 211th | C Todd Greene Ana |
| 19 | 222nd | P Heathcliff Slocumb Sea |
| 20 | 235th | OF Karim Garcia Ari |
| 21 | 246th | 3B Mark Lewis Phi |
| 22 | 259th | P Kirk Rueter SF |
| 23 | 270th | 3B Ron Coomer Min |
| 24 | 283rd | P Allen Watson Ana |
| 25 | 294th | 1B Lee Stevens Tex |
| 26 | 307th | P Mark Gardner SF |
| 27 | 318th | OF Troy O'Leary Bos |