| Round | Overall | Player |
|---|---|---|
| 1 | 11th | DH Juan Gonzalez Tex |
| 2 | 14th | 1B Mark McGwire StL |
| 3 | 35th | 1B Andres Galarraga Atl |
| 4 | 38th | P Kevin Brown SD |
| 5 | 59th | C Sandy Alomar Jr. Cle |
| 6 | 62nd | P Denny Neagle Atl |
| 7 | 83rd | OF Jay Buhner Sea |
| 8 | 86th | OF Paul O'Neill NYA |
| 9 | 107th | OF Ben Grieve Oak |
| 10 | 110th | SS Jeff Blauser ChN |
| 11 | 131st | 1B David Segui Sea |
| 12 | 134th | P Scott Erickson Bal |
| 13 | 155th | P Jimmy Key Bal |
| 14 | 158th | P Jamie Moyer Sea |
| 15 | 179th | 1B Jeff King KC |
| 16 | 182nd | 3B Jeff Cirillo Mil |
| 17 | 203rd | C Chris Hoiles Bal |
| 18 | 206th | OF Jeffrey Hammonds Bal |
| 19 | 227th | 2B Jose Offerman KC |
| 20 | 230th | P Bob Tewksbury Min |
| 21 | 251st | OF Jon Nunnally Cin |
| 22 | 254th | P Tom Candiotti Oak |
| 23 | 275th | P Kenny Rogers Oak |
| 24 | 278th | P Mark Gardner SF |
| 25 | 299th | DH Reggie Jefferson Bos |
| 26 | 302nd | 3B Joe Randa Det |
| 27 | 323rd | P Tim Worrell Det |