| Round | Overall | Player |
|---|---|---|
| 1 | 9th | OF Larry Walker Col |
| 2 | 16th | P Pedro Martinez Bos |
| 3 | 33rd | 2B Eric Young LA |
| 4 | 40th | 3B Travis Fryman Cle |
| 5 | 57th | SS Omar Vizquel Cle |
| 6 | 64th | P John Wetteland Tex |
| 7 | 81st | OF Brian L. Hunter Det |
| 8 | 88th | 1B Darin Erstad Ana |
| 9 | 105th | OF Rondell White Mon |
| 10 | 112th | OF Andruw Jones Atl |
| 11 | 129th | P Andy Benes Ari |
| 12 | 136th | P David Cone NYA |
| 13 | 153rd | P Livan Hernandez Fla |
| 14 | 160th | 1B Eric Karros LA |
| 15 | 177th | C Joe Girardi NYA |
| 16 | 184th | 3B Bobby Bonilla Fla |
| 17 | 201st | 3B Sean Berry Hou |
| 18 | 208th | 2B Quilvio Veras SD |
| 19 | 225th | SS Jose Vizcaino LA |
| 20 | 232nd | 1B Rico Brogna Phi |
| 21 | 249th | P Mark Clark ChN |
| 22 | 256th | C Chris Widger Mon |
| 23 | 273rd | P John Smiley Cle |
| 24 | 280th | OF Bip Roberts Det |
| 25 | 297th | OF Magglio Ordonez ChA |
| 26 | 304th | P Jaime Navarro ChA |
| 27 | 321st | 2B Miguel Cairo TB |