| Round | Overall | Player |
|---|---|---|
| 1 | 12th | P Roger Clemens Tor |
| 2 | 13th | P Randy Johnson Sea |
| 3 | 36th | P Curt Schilling Phi |
| 4 | 37th | P Denny Neagle Atl |
| 5 | 60th | P Darryl Kile Col |
| 6 | 61st | 2B Jeff Kent SF |
| 7 | 84th | 3B Bobby Bonilla Fla |
| 8 | 85th | SS Jeff Blauser ChN |
| 9 | 108th | OF Jim Edmonds Ana |
| 10 | 109th | C Dan Wilson Sea |
| 11 | 132nd | 1B J.T. Snow SF |
| 12 | 133rd | OF Marquis Grissom Mil |
| 13 | 156th | OF Mike Cameron ChA |
| 14 | 157th | DH Paul Molitor Min |
| 15 | 180th | C Todd Hundley NYN |
| 16 | 181st | 1B John Olerud NYN |
| 17 | 204th | 3B Russ Davis Sea |
| 18 | 205th | OF Magglio Ordonez ChA |
| 19 | 228th | C Brian Johnson SF |
| 20 | 229th | P Jason Dickson Ana |
| 21 | 252nd | P Billy Taylor Oak |
| 22 | 253rd | P Dennis Eckersley Bos |
| 23 | 276th | 2B Tony Fernandez Tor |
| 24 | 277th | P Tom Gordon Bos |
| 25 | 300th | SS Pat Meares Min |
| 26 | 301st | P Tim Wakefield Bos |
| 27 | 324th | OF Rickey Henderson Oak |