| Round | Overall | Player |
|---|---|---|
| 1 | 3rd | C Mike Piazza LA |
| 2 | 22nd | 2B Mike Lansing Col |
| 3 | 27th | OF Dante Bichette Col |
| 4 | 46th | P Mike Mussina Bal |
| 5 | 51st | DH Edgar Martinez Sea |
| 6 | 70th | P Charles Nagy Cle |
| 7 | 75th | P Scott Erickson Bal |
| 8 | 94th | P Ramon Martinez LA |
| 9 | 99th | P John Burkett Tex |
| 10 | 118th | 1B David Segui Sea |
| 11 | 123rd | 3B Dean Palmer KC |
| 12 | 142nd | SS Kevin Elster Tex |
| 13 | 147th | OF Reggie Sanders Cin |
| 14 | 166th | P Doug Jones Mil |
| 15 | 171st | P Rick Aguilera Min |
| 16 | 190th | OF Lance Johnson ChN |
| 17 | 195th | OF Garret Anderson Ana |
| 18 | 214th | 3B Jeff Cirillo Mil |
| 19 | 219th | 1B Mark Grace ChN |
| 20 | 238th | OF Quinton McCracken TB |
| 21 | 243rd | P Mike Fetters Oak |
| 22 | 262nd | 2B Mickey Morandini ChN |
| 23 | 267th | C Scott Hatteberg Bos |
| 24 | 286th | OF Shannon Stewart Tor |
| 25 | 291st | P John Thomson Col |
| 26 | 310th | P Ken Cloude Sea |
| 27 | 315th | P Butch Henry Bos |