| Round | Overall | Player |
|---|---|---|
| 1 | 6th | 1B Frank Thomas ChA |
| 2 | 19th | C Ivan Rodriguez Tex |
| 3 | 30th | P Mariano Rivera NYA |
| 4 | 43rd | OF Ray Lankford StL |
| 5 | 54th | DH Edgar Martinez Sea |
| 6 | 67th | P John Smoltz Atl |
| 7 | 78th | OF Reggie Sanders Cin |
| 8 | 91st | 3B Todd Zeile LA |
| 9 | 102nd | P Chuck Finley Ana |
| 10 | 115th | SS Neifi Perez Col |
| 11 | 126th | 2B Joey Cora Sea |
| 12 | 139th | P Wilson Alvarez TB |
| 13 | 150th | OF Al Martin Pit |
| 14 | 163rd | SS Kevin Elster Tex |
| 15 | 174th | 1B Jeff King KC |
| 16 | 187th | C Todd Hundley NYN |
| 17 | 198th | P Jason Dickson Ana |
| 18 | 211th | C Jim Leyritz Bos |
| 19 | 222nd | P Orel Hershiser SF |
| 20 | 235th | OF Michael Tucker Atl |
| 21 | 246th | 3B Wade Boggs TB |
| 22 | 259th | P Mike Fetters Oak |
| 23 | 270th | P Allen Watson Ana |
| 24 | 283rd | P Kevin Appier KC |
| 25 | 294th | OF Brian McRae NYN |
| 26 | 307th | C Todd Pratt NYN |
| 27 | 318th | 2B Tony Graffanino Atl |