| Round | Overall | Player |
|---|---|---|
| 1 | 3rd | OF Larry Walker Col |
| 2 | 22nd | 3B Ken Caminiti SD |
| 3 | 27th | 2B Mike Lansing Col |
| 4 | 46th | 1B Rafael Palmeiro Bal |
| 5 | 51st | 3B Robin Ventura ChA |
| 6 | 70th | OF Gary Sheffield Fla |
| 7 | 75th | P Tom Glavine Atl |
| 8 | 94th | P Jeff Shaw Cin |
| 9 | 99th | P David Cone NYA |
| 10 | 118th | P Jeff Fassero Sea |
| 11 | 123rd | SS Omar Vizquel Cle |
| 12 | 142nd | C Charles Johnson Fla |
| 13 | 147th | P Jeff Brantley StL |
| 14 | 166th | OF Marty Cordova Min |
| 15 | 171st | P Roberto Hernandez TB |
| 16 | 190th | P Dustin Hermanson Mon |
| 17 | 195th | C Terry Steinbach Min |
| 18 | 214th | P Rich Loiselle Pit |
| 19 | 219th | 1B Paul Sorrento TB |
| 20 | 238th | OF Marquis Grissom Mil |
| 21 | 243rd | DH Cecil Fielder Ana |
| 22 | 262nd | P Steve Trachsel ChN |
| 23 | 267th | 3B Ed Sprague Tor |
| 24 | 286th | OF Tom Goodwin Tex |
| 25 | 291st | 2B Carlos Baerga NYN |
| 26 | 310th | P Dennis Eckersley Bos |
| 27 | 315th | OF Greg Vaughn SD |