| Round | Overall | Player |
|---|---|---|
| 1 | 8th |
1B
Jeff Bagwell
|
| 2 | 17th |
3B
Scott Rolen
|
| 3 | 32nd | P Kevin Brown |
| 4 | 41st |
2B
Damion Easley
|
| 5 | 56th | P Troy Percival |
| 6 | 65th | OF Raul Mondesi |
| 7 | 80th |
C
Dave Nilsson
|
| 8 | 89th |
OF
Brian Jordan
|
| 9 | 104th |
P
Andy Pettitte
|
| 10 | 113th |
OF
B.J. Surhoff
|
| 11 | 128th |
1B
Jason Giambi
|
| 12 | 137th |
SS
Tony Batista
|
| 13 | 152nd |
OF
Dmitri Young
|
| 14 | 161st |
P
Pat Hentgen
|
| 15 | 176th |
C
Benito Santiago
|
| 16 | 185th |
OF
David Segui
|
| 17 | 200th |
P
Mark Wohlers
|
| 18 | 209th |
3B
Fernando Tatis
|
| 19 | 224th |
P
Steve Trachsel
|
| 20 | 233rd |
OF
Richard Hidalgo
|
| 21 | 248th |
P
Jeff Brantley
|
| 22 | 257th |
P
Chris Holt
|
| 23 | 272nd |
2B
Carlos Guillen
|
| 24 | 281st |
SS
Ricky Gutierrez
|
| 25 | 296th |
OF
Trot Nixon
|
| 26 | 305th |
P
Pete Schourek
|