| Round | Overall | Player |
|---|---|---|
| 1 | 4th | SS Derek Jeter NYA |
| 2 | 21st | 2B Roberto Alomar Cle |
| 3 | 28th | 1B Rafael Palmeiro Tex |
| 4 | 45th | 3B Vinny Castilla TB |
| 5 | 52nd | SP Kevin Millwood Atl |
| 6 | 69th | OF Magglio Ordonez ChA |
| 7 | 76th | RP Armando Benitez NYN |
| 8 | 93rd | OF Moises Alou Hou |
| 9 | 100th | RP Bob Howry ChA |
| 10 | 117th | RP Paul Shuey Cle |
| 11 | 124th | OF Shannon Stewart Tor |
| 12 | 141st | C Jorge Posada NYA |
| 13 | 148th | RP Danny Graves Cin |
| 14 | 165th | 3B Adrian Beltre LA |
| 15 | 172nd | SP Chan Ho Park LA |
| 16 | 189th | SP Jason Schmidt Pit |
| 17 | 196th | OF Gabe Kapler Tex |
| 18 | 213th | SP Scott Elarton Hou |
| 19 | 220th | C Charles Johnson Bal |
| 20 | 237th | OF Bob Higginson Det |
| 21 | 244th | 1B Pat Burrell Phi |
| 22 | 261st | 1B Ryan Klesko SD |
| 23 | 268th | SP Wilson Alvarez TB |
| 24 | 285th | OF Steve Finley Ari |
| 25 | 292nd | SP Jeff Weaver Det |
| 26 | 309th | RP Rod Beck Bos |
| 27 | 316th | SP Jason Johnson Bal |