| Round | Overall | Player |
|---|---|---|
| 1 | 1st | SS Alex Rodriguez Sea |
| 2 | 24th | OF Larry Walker Col |
| 3 | 25th | SP Kevin Brown LA |
| 4 | 48th | 3B Matt Williams Ari |
| 5 | 49th | 2B Jay Bell Ari |
| 6 | 72nd | C Jason Varitek Bos |
| 7 | 73rd | RP John Wetteland Tex |
| 8 | 96th | 1B Fred McGriff TB |
| 9 | 97th | SP David Wells Tor |
| 10 | 120th | OF Brady Anderson Bal |
| 11 | 121st | SP David Cone NYA |
| 12 | 144th | OF Tony Gwynn SD |
| 13 | 145th | SP Dave Burba Cle |
| 14 | 168th | RP Jose Mesa Sea |
| 15 | 169th | SP Pedro Astacio Col |
| 16 | 192nd | 1B Mark Grace ChN |
| 17 | 193rd | RP Ricky Bottalico KC |
| 18 | 216th | OF Steve Finley Ari |
| 19 | 217th | 3B Scott Brosius NYA |
| 20 | 240th | OF Al Martin SD |
| 21 | 241st | SS Mike Bordick Bal |
| 22 | 264th | C Sandy Alomar Jr. Cle |
| 23 | 265th | SP Kirk Rueter SF |
| 24 | 288th | RP Kerry Ligtenberg Atl |
| 25 | 289th | 2B Todd Walker Min |
| 26 | 312th | OF Garret Anderson Ana |
| 27 | 313th | OF Dmitri Young Cin |