| Round | Overall | Player |
|---|---|---|
| 1 | 4th | SP Pedro Martinez Bos |
| 2 | 21st | RP Mariano Rivera NYA |
| 3 | 28th | OF Larry Walker Col |
| 4 | 45th | SP Mike Hampton NYN |
| 5 | 52nd | 3B Vinny Castilla TB |
| 6 | 69th | SP Roger Clemens NYA |
| 7 | 76th | 1B Mo Vaughn Ana |
| 8 | 93rd | SP Tom Glavine Atl |
| 9 | 100th | RP Billy Koch Tor |
| 10 | 117th | OF Brian Jordan Atl |
| 11 | 124th | DH Edgar Martinez Sea |
| 12 | 141st | OF Dante Bichette Cin |
| 13 | 148th | SS Royce Clayton Tex |
| 14 | 165th | SP Eric Milton Min |
| 15 | 172nd | SS Mark Grudzielanek LA |
| 16 | 189th | OF Mike Cameron Sea |
| 17 | 196th | 2B Damion Easley Det |
| 18 | 213th | OF Jim Edmonds StL |
| 19 | 220th | 2B Pokey Reese Cin |
| 20 | 237th | SP Dave Burba Cle |
| 21 | 244th | C John Flaherty TB |
| 22 | 261st | 3B Ken Caminiti Hou |
| 23 | 268th | 1B Mark Grace ChN |
| 24 | 285th | 3B Cal Ripken Bal |
| 25 | 292nd | C Eli Marrero StL |
| 26 | 309th | C Bobby Estalella SF |
| 27 | 316th | SS Pat Meares Pit |