| Round | Overall | Player |
|---|---|---|
| 1 | 7th | OF Ken Griffey Jr Cin |
| 2 | 18th | C Jason Kendall Pit |
| 3 | 31st | SP Greg Maddux Atl |
| 4 | 42nd | OF Bernie Williams NYA |
| 5 | 55th | 3B Matt Williams Ari |
| 6 | 66th | 1B Jim Thome Cle |
| 7 | 79th | SP Jose Lima Hou |
| 8 | 90th | SP Curt Schilling Phi |
| 9 | 103rd | SS Tony Womack Ari |
| 10 | 114th | RP Robb Nen SF |
| 11 | 127th | 2B Jose Offerman Bos |
| 12 | 138th | OF Ray Lankford StL |
| 13 | 151st | SP Kerry Wood ChN |
| 14 | 162nd | SP Jamie Moyer Sea |
| 15 | 175th | OF Brady Anderson Bal |
| 16 | 186th | 1B Fred McGriff TB |
| 17 | 199th | SP Darryl Kile StL |
| 18 | 210th | OF Troy O'Leary Bos |
| 19 | 223rd | 2B Bret Boone SD |
| 20 | 234th | SP Charles Nagy Cle |
| 21 | 247th | 3B Phil Nevin SD |
| 22 | 258th | SP Pedro Astacio Col |
| 23 | 271st | RP Mike Williams Pit |
| 24 | 282nd | SP Scott Erickson Bal |
| 25 | 295th | C Sandy Alomar Jr. Cle |
| 26 | 306th | SS Alex Gonzalez Tor |
| 27 | 319th | OF Rickey Henderson NYN |