| Round | Overall | Player |
|---|---|---|
| 1 | 5th | C Mike Piazza NYN |
| 2 | 20th | 2B Roberto Alomar Cle |
| 3 | 29th | 1B Rafael Palmeiro Tex |
| 4 | 44th | SP Orlando Hernandez NYA |
| 5 | 53rd | OF Greg Vaughn TB |
| 6 | 68th | RP Robb Nen SF |
| 7 | 77th | SP Chuck Finley Cle |
| 8 | 92nd | 3B Dean Palmer Det |
| 9 | 101st | DH Jose Canseco TB |
| 10 | 116th | 1B Andres Galarraga Atl |
| 11 | 125th | SP Omar Daal Ari |
| 12 | 140th | OF Matt Stairs Oak |
| 13 | 149th | SP Russ Ortiz SF |
| 14 | 164th | OF Ellis Burks SF |
| 15 | 173rd | SP Dave Burba Cle |
| 16 | 188th | RP Mike Williams Pit |
| 17 | 197th | SS Jose Hernandez Mil |
| 18 | 212th | OF Henry Rodriguez ChN |
| 19 | 221st | 2B Bret Boone SD |
| 20 | 236th | SP Joey Hamilton Tor |
| 21 | 245th | OF Jose Cruz Jr Tor |
| 22 | 260th | SP Brian Rose Bos |
| 23 | 269th | C Sandy Alomar Jr. Cle |
| 24 | 284th | OF Chad Hermansen Pit |
| 25 | 293rd | RP Jose Mesa Sea |
| 26 | 308th | SS Damian Jackson SD |
| 27 | 317th | 3B Shane Andrews ChN |