| Round | Overall | Player |
|---|---|---|
| 1 | 2nd | 1B Jeff Bagwell Hou |
| 2 | 23rd | SP Randy Johnson Ari |
| 3 | 26th | SP Kevin Brown LA |
| 4 | 47th | 2B Jeff Kent SF |
| 5 | 50th | OF Jeromy Burnitz Mil |
| 6 | 71st | SS Edgar Renteria StL |
| 7 | 74th | SP Curt Schilling Phi |
| 8 | 95th | OF Moises Alou Hou |
| 9 | 98th | SP Pat Hentgen StL |
| 10 | 119th | C Jorge Posada NYA |
| 11 | 122nd | SP Darryl Kile StL |
| 12 | 143rd | 3B Scott Brosius NYA |
| 13 | 146th | OF Jim Edmonds StL |
| 14 | 167th | SP Chris Carpenter Tor |
| 15 | 170th | OF Richard Hidalgo Hou |
| 16 | 191st | 3B Eric Chavez Oak |
| 17 | 194th | 1B Lee Stevens Mon |
| 18 | 215th | SP Todd Stottlemyre Ari |
| 19 | 218th | SP Javier Vazquez Mon |
| 20 | 239th | 2B Delino DeShields Bal |
| 21 | 242nd | SP Todd Ritchie Pit |
| 22 | 263rd | C Eli Marrero StL |
| 23 | 266th | SP Chris Holt Hou |
| 24 | 287th | OF Ruben Rivera SD |
| 25 | 290th | SP Shawn Estes SF |
| 26 | 311th | SP Jaret Wright Cle |
| 27 | 314th | OF Peter Bergeron Mon |