| Round | Overall | Player |
|---|---|---|
| 1 | 6th | OF Ken Griffey Jr Cin |
| 2 | 19th | OF Juan Gonzalez Det |
| 3 | 30th | 1B Jason Giambi Oak |
| 4 | 43rd | RP Ugueth Urbina Mon |
| 5 | 54th | C Javy Lopez Atl |
| 6 | 67th | RP Mike Jackson Phi |
| 7 | 78th | SS Tony Womack Ari |
| 8 | 91st | 3B Tony Batista Tor |
| 9 | 102nd | OF Brian Jordan Atl |
| 10 | 115th | 1B Eric Karros LA |
| 11 | 126th | SP Tim Hudson Oak |
| 12 | 139th | RP Anthony Alford Fla |
| 13 | 150th | OF Reggie Sanders Atl |
| 14 | 163rd | 2B Carlos Febles KC |
| 15 | 174th | 2B Damion Easley Det |
| 16 | 187th | OF Roger Cedeno Hou |
| 17 | 198th | 3B Todd Zeile NYN |
| 18 | 211th | SP Kenny Rogers Tex |
| 19 | 222nd | SS Royce Clayton Tex |
| 20 | 235th | OF Juan Encarnacion Det |
| 21 | 246th | 3B Corey Koskie Min |
| 22 | 259th | SP Omar Olivares Oak |
| 23 | 270th | SP Brian Anderson Ari |
| 24 | 283rd | SP Bobby J. Jones NYN |
| 25 | 294th | RP C.J. Nitkowski Det |
| 26 | 307th | C Brook Fordyce ChA |
| 27 | 318th | SP Brett Tomko Sea |