| Round | Overall | Player |
|---|---|---|
| 1 | 2nd | SS Nomar Garciaparra Bos |
| 2 | 23rd | OF Juan Gonzalez Det |
| 3 | 26th | RP Mariano Rivera NYA |
| 4 | 47th | C Javy Lopez Atl |
| 5 | 50th | 1B Mo Vaughn Ana |
| 6 | 71st | 2B Chuck Knoblauch NYA |
| 7 | 74th | 1B Frank Thomas ChA |
| 8 | 95th | OF Tim Salmon Ana |
| 9 | 98th | SP Curt Schilling Phi |
| 10 | 119th | SP Andy Ashby Phi |
| 11 | 122nd | 3B Troy Glaus Ana |
| 12 | 143rd | RP Jason Isringhausen Oak |
| 13 | 146th | SP Chuck Finley Cle |
| 14 | 167th | SP Scott Elarton Hou |
| 15 | 170th | C Dave Nilsson F/A |
| 16 | 191st | OF Brady Anderson Bal |
| 17 | 194th | 2B Carlos Febles KC |
| 18 | 215th | SS Jose Hernandez Mil |
| 19 | 218th | RP Paul Abbott Sea |
| 20 | 239th | OF Roger Cedeno Hou |
| 21 | 242nd | SS Alex Gonzalez Fla |
| 22 | 263rd | 3B Scott Brosius NYA |
| 23 | 266th | RP Jose Mesa Sea |
| 24 | 287th | SP Livan Hernandez SF |
| 25 | 290th | C Eli Marrero StL |
| 26 | 311th | OF Preston Wilson Fla |
| 27 | 314th | 1B David Segui Tex |