| Round | Overall | Player |
|---|---|---|
| 1 | 6th | 3B Chipper Jones Atl |
| 2 | 19th | 2B Craig Biggio Hou |
| 3 | 30th | RP Billy Wagner Hou |
| 4 | 43rd | SP Mike Mussina Bal |
| 5 | 54th | OF Andruw Jones Atl |
| 6 | 67th | SS Edgar Renteria StL |
| 7 | 78th | 1B Sean Casey Cin |
| 8 | 91st | C Jason Varitek Bos |
| 9 | 102nd | OF Johnny Damon KC |
| 10 | 115th | SP Kris Benson Pit |
| 11 | 126th | SP Al Leiter NYN |
| 12 | 139th | SP Aaron Sele Sea |
| 13 | 150th | OF Luis Gonzalez Ari |
| 14 | 163rd | SP Andy Pettitte NYA |
| 15 | 174th | OF Cliff Floyd Fla |
| 16 | 187th | SP Sterling Hitchcock SD |
| 17 | 198th | SP Charles Nagy Cle |
| 18 | 211th | 3B Joe Randa KC |
| 19 | 222nd | 1B Mark Grace ChN |
| 20 | 235th | OF Steve Finley Ari |
| 21 | 246th | SP Andy Benes StL |
| 22 | 259th | C John Flaherty TB |
| 23 | 270th | DH John Jaha Oak |
| 24 | 283rd | 2B Quilvio Veras Atl |
| 25 | 294th | SP Jaret Wright Cle |
| 26 | 307th | RP Ramiro Mendoza NYA |
| 27 | 318th | SP Scott Erickson Bal |