| Round | Overall | Player |
|---|---|---|
| 1 | 3rd | SS Derek Jeter NYA |
| 2 | 22nd | C Jason Kendall Pit |
| 3 | 27th | 1B Carlos Delgado Tor |
| 4 | 46th | OF Brian S. Giles Pit |
| 5 | 51st | 1B Jason Giambi Oak |
| 6 | 70th | RP Billy Koch Tor |
| 7 | 75th | 3B Dean Palmer Det |
| 8 | 94th | OF Magglio Ordonez ChA |
| 9 | 99th | DH Jose Canseco TB |
| 10 | 118th | OF Jermaine Dye KC |
| 11 | 123rd | SP Eric Milton Min |
| 12 | 142nd | 3B Eric Chavez Oak |
| 13 | 147th | RP Paul Shuey Cle |
| 14 | 166th | OF Jim Edmonds StL |
| 15 | 171st | SP Matt Clement SD |
| 16 | 190th | SP Darryl Kile StL |
| 17 | 195th | 1B Mike Sweeney KC |
| 18 | 214th | OF Reggie Sanders Atl |
| 19 | 219th | SP Francisco Cordova Pit |
| 20 | 238th | 2B Randy Velarde Oak |
| 21 | 243rd | SP Alex Fernandez Fla |
| 22 | 262nd | SP Jon Lieber ChN |
| 23 | 267th | SP Ryan Rupe TB |
| 24 | 286th | SP Dave Mlicki Det |
| 25 | 291st | C Ramon Hernandez Oak |
| 26 | 310th | SP Matt Morris StL |
| 27 | 315th | SP Garrett Stephenson StL |