| Round | Overall | Player |
|---|---|---|
| 1 | 8th | OF Vladimir Guerrero Mon |
| 2 | 17th | SP Kevin Brown LA |
| 3 | 32nd | 3B Fernando Tatis StL |
| 4 | 41st | 1B Mo Vaughn Ana |
| 5 | 56th | SP Kris Benson Pit |
| 6 | 65th | SS Edgar Renteria StL |
| 7 | 80th | C Jason Varitek Bos |
| 8 | 89th | RP Roberto Hernandez TB |
| 9 | 104th | OF Carlos Beltran KC |
| 10 | 113th | 2B Carlos Febles KC |
| 11 | 128th | DH Jose Canseco TB |
| 12 | 137th | OF J.D. Drew StL |
| 13 | 152nd | SP Eric Milton Min |
| 14 | 161st | RP Mike Timlin Bal |
| 15 | 176th | OF Reggie Sanders Atl |
| 16 | 185th | SP Chris Holt Hou |
| 17 | 200th | 1B Mike Sweeney KC |
| 18 | 209th | SP Jeff Weaver Det |
| 19 | 224th | 2B Todd Walker Min |
| 20 | 233rd | SP Todd Ritchie Pit |
| 21 | 248th | OF Rondell White Mon |
| 22 | 257th | C Charles Johnson Bal |
| 23 | 272nd | SP Joe Nathan SF |
| 24 | 281st | 3B Shane Andrews ChN |
| 25 | 296th | SS Adam Everett F/A |
| 26 | 305th | OF Paul O'Neill NYA |
| 27 | 320th | RP John Johnstone SF |