| Round | Overall | Player |
|---|---|---|
| 1 | 7th | 3B Chipper Jones Atl |
| 2 | 18th | OF Barry Bonds SF |
| 3 | 31st | 1B Carlos Delgado Tor |
| 4 | 42nd | 1B Mo Vaughn Ana |
| 5 | 55th | RP Matt Mantei Ari |
| 6 | 66th | RP John Wetteland Tex |
| 7 | 79th | 1B Richie Sexson Cle |
| 8 | 90th | RP Roberto Hernandez TB |
| 9 | 103rd | OF Greg Vaughn TB |
| 10 | 114th | SP Brad Radke Min |
| 11 | 127th | OF Ray Lankford StL |
| 12 | 138th | SP Denny Neagle Cin |
| 13 | 151st | 2B Homer Bush Tor |
| 14 | 162nd | 1B John Olerud Sea |
| 15 | 175th | OF Roger Cedeno Hou |
| 16 | 186th | SS Royce Clayton Tex |
| 17 | 199th | 3B Phil Nevin SD |
| 18 | 210th | SP Chan Ho Park LA |
| 19 | 223rd | SP Pat Hentgen StL |
| 20 | 234th | OF Troy O'Leary Bos |
| 21 | 247th | SP Todd Stottlemyre Ari |
| 22 | 258th | OF Bob Higginson Det |
| 23 | 271st | OF Todd Greene Tor |
| 24 | 282nd | C John Flaherty TB |
| 25 | 295th | SP Scott Erickson Bal |
| 26 | 306th | SS Desi Relaford Phi |
| 27 | 319th | SP Kirk Rueter SF |