| Round | Overall | Player |
|---|---|---|
| 1 | 4th | OF Ken Griffey Jr Cin |
| 2 | 21st | 2B Craig Biggio Hou |
| 3 | 28th | 1B Todd Helton Col |
| 4 | 45th | SP Bartolo Colon Cle |
| 5 | 52nd | RP Jeff Shaw LA |
| 6 | 69th | OF Gary Sheffield LA |
| 7 | 76th | SS Neifi Perez Col |
| 8 | 93rd | 3B Vinny Castilla TB |
| 9 | 100th | C Todd Hundley LA |
| 10 | 117th | SP Andy Ashby Phi |
| 11 | 124th | RP Danny Graves Cin |
| 12 | 141st | C Jorge Posada NYA |
| 13 | 148th | SP Russ Ortiz SF |
| 14 | 165th | SP Kerry Wood ChN |
| 15 | 172nd | OF Geoff Jenkins Mil |
| 16 | 189th | 3B Todd Zeile NYN |
| 17 | 196th | SP Jason Schmidt Pit |
| 18 | 213th | RP Anthony Alford Fla |
| 19 | 220th | 2B Todd Walker Min |
| 20 | 237th | OF Ellis Burks SF |
| 21 | 244th | SP Pedro Astacio Col |
| 22 | 261st | SP Kip Wells ChA |
| 23 | 268th | 3B Corey Koskie Min |
| 24 | 285th | SS Rich Aurilia SF |
| 25 | 292nd | SP Gil Meche Sea |
| 26 | 309th | SP Vladimir Nunez Fla |
| 27 | 316th | OF Derek Bell NYN |