| Round | Overall | Player |
|---|---|---|
| 1 | 9th | OF Sammy Sosa ChN |
| 2 | 16th | OF Larry Walker Col |
| 3 | 33rd | OF Greg Vaughn TB |
| 4 | 40th | 3B Matt Williams Ari |
| 5 | 57th | SP Mike Mussina Bal |
| 6 | 64th | 2B Chuck Knoblauch NYA |
| 7 | 81st | SP David Wells Tor |
| 8 | 88th | SS Tony Womack Ari |
| 9 | 105th | 1B John Olerud Sea |
| 10 | 112th | C Jorge Posada NYA |
| 11 | 129th | RP Danny Graves Cin |
| 12 | 136th | DH Jose Canseco TB |
| 13 | 153rd | OF Jim Edmonds StL |
| 14 | 160th | RP Todd Jones Det |
| 15 | 177th | 2B Randy Velarde Oak |
| 16 | 184th | SP Darren Dreifort LA |
| 17 | 201st | SS Deivi Cruz Det |
| 18 | 208th | 1B Will Clark Bal |
| 19 | 225th | 3B Scott Brosius NYA |
| 20 | 232nd | C Ben Davis SD |
| 21 | 249th | SP Carl Pavano Mon |
| 22 | 256th | SP Kevin Tapani ChN |
| 23 | 273rd | RP Eddie Guardado Min |
| 24 | 280th | SP Jamey Wright Mil |
| 25 | 297th | RP Mike Trombley Bal |
| 26 | 304th | RP John Johnstone SF |
| 27 | 321st | OF Mark Kotsay Fla |