| Round | Overall | Player |
|---|---|---|
| 1 | 8th | 3B Chipper Jones Atl |
| 2 | 17th | OF Albert Belle Bal |
| 3 | 32nd | RP Billy Wagner Hou |
| 4 | 41st | OF Carl Everett Bos |
| 5 | 56th | SP Bartolo Colon Cle |
| 6 | 65th | RP Matt Mantei Ari |
| 7 | 80th | OF Brian Jordan Atl |
| 8 | 89th | 1B Eric Karros LA |
| 9 | 104th | 3B Tony Batista Tor |
| 10 | 113th | C Jason Varitek Bos |
| 11 | 128th | SP Pete Harnisch Cin |
| 12 | 137th | OF B.J. Surhoff Bal |
| 13 | 152nd | OF Brady Anderson Bal |
| 14 | 161st | SP Denny Neagle Cin |
| 15 | 176th | 2B Damion Easley Det |
| 16 | 185th | 1B Paul Konerko ChA |
| 17 | 200th | SP Brian Anderson Ari |
| 18 | 209th | OF Troy O'Leary Bos |
| 19 | 224th | RP Scott Williamson Cin |
| 20 | 233rd | C Charles Johnson Bal |
| 21 | 248th | 1B J.T. Snow SF |
| 22 | 257th | SP Kip Wells ChA |
| 23 | 272nd | SP Steve Woodard Mil |
| 24 | 281st | 1B Rico Brogna Phi |
| 25 | 296th | SP Steve Parris Cin |
| 26 | 305th | 2B Warren Morris Pit |
| 27 | 320th | SS Alex Gonzalez Fla |