| Round | Overall | Player |
|---|---|---|
| 1 | 2nd | SS Nomar Garciaparra Bos |
| 2 | 23rd | OF Bernie Williams NYA |
| 3 | 26th | OF Shawn Green LA |
| 4 | 47th | RP Trevor Hoffman SD |
| 5 | 50th | SP Kevin Millwood Atl |
| 6 | 71st | RP Troy Percival Ana |
| 7 | 74th | 1B Mike Sweeney KC |
| 8 | 95th | 1B Tony Clark Det |
| 9 | 98th | SP Andy Pettitte NYA |
| 10 | 119th | RP Bob Wickman Mil |
| 11 | 122nd | 3B Ken Caminiti Hou |
| 12 | 143rd | OF Ellis Burks SF |
| 13 | 146th | SP Dustin Hermanson Mon |
| 14 | 167th | 2B Damion Easley Det |
| 15 | 170th | SP Kenny Rogers Tex |
| 16 | 191st | 3B Cal Ripken Bal |
| 17 | 194th | OF Geoff Jenkins Mil |
| 18 | 215th | SP Carl Pavano Mon |
| 19 | 218th | SP Chris Carpenter Tor |
| 20 | 239th | C Charles Johnson Bal |
| 21 | 242nd | 2B Mike Lansing Col |
| 22 | 263rd | SP Scott Erickson Bal |
| 23 | 266th | 1B Brad Fullmer Tor |
| 24 | 287th | 1B Lee Stevens Mon |
| 25 | 290th | OF Derek Bell NYN |
| 26 | 311th | C Doug Mirabelli SF |
| 27 | 314th | SP Ken Hill Ana |