| Round | Overall | Player |
|---|---|---|
| 1 | 5th | C Mike Piazza NYN |
| 2 | 20th | SS Nomar Garciaparra Bos |
| 3 | 29th | 3B Scott Rolen Phi |
| 4 | 44th | 1B Jim Thome Cle |
| 5 | 53rd | OF Bernie Williams NYA |
| 6 | 68th | OF Jim Edmonds StL |
| 7 | 77th | RP Danny Graves Cin |
| 8 | 92nd | 2B Craig Biggio Hou |
| 9 | 101st | SS Omar Vizquel Cle |
| 10 | 116th | RP Jeff Shaw LA |
| 11 | 125th | SP Rick Helling Tex |
| 12 | 140th | SP Jon Lieber ChN |
| 13 | 149th | OF Greg Vaughn TB |
| 14 | 164th | SP Darren Dreifort LA |
| 15 | 173rd | SP Kenny Rogers Tex |
| 16 | 188th | SP Sidney Ponson Bal |
| 17 | 197th | SP Ben Sheets Mil |
| 18 | 212th | OF Steve Finley Ari |
| 19 | 221st | SP Pedro Astacio Col |
| 20 | 236th | C Ben Molina Ana |
| 21 | 245th | 1B Fred McGriff TB |
| 22 | 260th | OF Rondell White ChN |
| 23 | 269th | SP Chris Carpenter Tor |
| 24 | 284th | 3B Bill Mueller ChN |
| 25 | 293rd | 2B Fernando Vina StL |
| 26 | 308th | SP LaTroy Hawkins Min |
| 27 | 317th | RP Scott Schoeneweis Ana |
| 28 | 332nd | SS Damian Jackson SD |
| 29 | 341st | SP Kent Bottenfield Hou |