| Round | Overall | Player |
|---|---|---|
| 1 | 11th | SP Randy Johnson Ari |
| 2 | 14th | OF Sammy Sosa ChN |
| 3 | 35th | 1B Rafael Palmeiro Tex |
| 4 | 38th | OF Johnny Damon Oak |
| 5 | 59th | RP Kazuhiro Sasaki Sea |
| 6 | 62nd | C Mike Lieberthal Phi |
| 7 | 83rd | 3B Phil Nevin SD |
| 8 | 86th | RP Jason Isringhausen Oak |
| 9 | 107th | RP Todd Jones Det |
| 10 | 110th | OF Luis Gonzalez Ari |
| 11 | 131st | OF Ellis Burks Cle |
| 12 | 134th | DH Andres Galarraga Tex |
| 13 | 155th | C Todd Hundley ChN |
| 14 | 158th | SP Mark Mulder Oak |
| 15 | 179th | SS Cristian Guzman Min |
| 16 | 182nd | 2B Jose Ortiz Oak |
| 17 | 203rd | SP Ramon Ortiz Ana |
| 18 | 206th | OF Terrence Long Oak |
| 19 | 227th | SP Denny Neagle Col |
| 20 | 230th | SP Osvaldo Fernandez Cin |
| 21 | 251st | 3B Aramis Ramirez Pit |
| 22 | 254th | SP Andy Benes StL |
| 23 | 275th | DH John Jaha Oak |
| 24 | 278th | SS Carlos Guillen Sea |
| 25 | 299th | 2B Luis Rivas Min |
| 26 | 302nd | 1B Mark Grace Ari |
| 27 | 323rd | SP Sterling Hitchcock SD |
| 28 | 326th | SP Makoto Suzuki KC |
| 29 | 347th | OF Juan Pierre Col |