| Round | Overall | Player |
|---|---|---|
| 1 | 7th | OF Manny Ramirez Bos |
| 2 | 18th | OF Barry Bonds SF |
| 3 | 31st | 1B Rafael Palmeiro Tex |
| 4 | 42nd | SP Bartolo Colon Cle |
| 5 | 55th | SP Chan Ho Park LA |
| 6 | 66th | SS Edgar Renteria StL |
| 7 | 79th | RP Kazuhiro Sasaki Sea |
| 8 | 90th | C Todd Hundley ChN |
| 9 | 103rd | 2B Todd Walker Col |
| 10 | 114th | SP Rick Ankiel StL |
| 11 | 127th | OF Ben Grieve TB |
| 12 | 138th | 3B Robin Ventura NYN |
| 13 | 151st | RP Troy Percival Ana |
| 14 | 162nd | SP Glendon Rusch NYN |
| 15 | 175th | 3B Aaron Boone Cin |
| 16 | 186th | OF Mike Cameron Sea |
| 17 | 199th | 1B Tony Clark Det |
| 18 | 210th | DH Andres Galarraga Tex |
| 19 | 223rd | C Bobby Estalella SF |
| 20 | 234th | SP Frank Castillo Bos |
| 21 | 247th | SP Russ Ortiz SF |
| 22 | 258th | SS Carlos Guillen Sea |
| 23 | 271st | SP Andy Benes StL |
| 24 | 282nd | SP Chris Carpenter Tor |
| 25 | 295th | OF B.J. Surhoff Atl |
| 26 | 306th | SP Cal Eldred ChA |
| 27 | 319th | 2B Mark Grudzielanek LA |
| 28 | 330th | OF Ron Gant Col |
| 29 | 343rd | SP Kip Wells ChA |