| Round | Overall | Player |
|---|---|---|
| 1 | 5th | C Mike Piazza NYN |
| 2 | 20th | SP Kevin Brown LA |
| 3 | 29th | SS Miguel Tejada Oak |
| 4 | 44th | 3B Jeff Cirillo Col |
| 5 | 53rd | SP Curt Schilling Ari |
| 6 | 68th | 2B Eric Young ChN |
| 7 | 77th | OF Raul Mondesi Tor |
| 8 | 92nd | RP Keith Foulke ChA |
| 9 | 101st | SP Roger Clemens NYA |
| 10 | 116th | OF Jeromy Burnitz Mil |
| 11 | 125th | 1B Ryan Klesko SD |
| 12 | 140th | OF Mark Kotsay SD |
| 13 | 149th | SP Darren Dreifort LA |
| 14 | 164th | RP Curt Leskanic Mil |
| 15 | 173rd | OF Jeffrey Hammonds Mil |
| 16 | 188th | OF Matt Stairs ChN |
| 17 | 197th | OF Cliff Floyd Fla |
| 18 | 212th | SP Bruce Chen Phi |
| 19 | 221st | 3B Bill Mueller ChN |
| 20 | 236th | C Ben Molina Ana |
| 21 | 245th | SS Royce Clayton ChA |
| 22 | 260th | 1B Mark Grace Ari |
| 23 | 269th | SP Jamey Wright Mil |
| 24 | 284th | SP Blake Stein KC |
| 25 | 293rd | SP Tony Armas Jr. Mon |
| 26 | 308th | SP Julian Tavarez ChN |
| 27 | 317th | OF Tom Goodwin LA |
| 28 | 332nd | SP Albie Lopez TB |
| 29 | 341st | SP Steve Woodard Cle |