| Round | Overall | Player |
|---|---|---|
| 1 | 5th |
1B
Jeff Bagwell
|
| 2 | 20th |
OF
Vladimir Guerrero
|
| 3 | 29th |
SP
Tom Glavine
|
| 4 | 44th |
RP
John Rocker
|
| 5 | 53rd |
SP
Darryl Kile
|
| 6 | 68th |
OF
Jim Edmonds
|
| 7 | 77th |
C
Javy Lopez
|
| 8 | 92nd |
SP
Rick Helling
|
| 9 | 101st |
2B
Craig Biggio
|
| 10 | 116th |
RP
Matt Mantei
|
| 11 | 125th |
SS
Rafael Furcal
|
| 12 | 140th |
OF
Jeromy Burnitz
|
| 13 | 149th |
3B
Travis Fryman
|
| 14 | 164th | SP Darren Dreifort |
| 15 | 173rd | 1B Eric Karros |
| 16 | 188th |
2B
Chuck Knoblauch
|
| 17 | 197th |
OF
Terrence Long
|
| 18 | 212th | SP Ismael Valdez |
| 19 | 221st |
SP
Kirk Rueter
|
| 20 | 236th |
SP
Esteban Loaiza
|
| 21 | 245th |
SP
Jamie Moyer
|
| 22 | 260th |
C
Sandy Alomar Jr.
|
| 23 | 269th |
3B
Aramis Ramirez
|
| 24 | 284th |
SP
Jose Rosado
|
| 25 | 293rd |
OF
Juan Pierre
|
| 26 | 308th |
OF
Delino DeShields
|
| 27 | 317th |
SP
Hideki Irabu
|
| 28 | 332nd |
SS
Damian Jackson
|
| 29 | 341st |
C
Einar Diaz
|