| Round | Overall | Player |
|---|---|---|
| 1 | 8th | 1B Carlos Delgado Tor |
| 2 | 17th | 2B Jeff Kent SF |
| 3 | 32nd | C Jason Kendall Pit |
| 4 | 41st | 1B Mike Sweeney KC |
| 5 | 56th | 3B Jeff Cirillo Col |
| 6 | 65th | OF Shawn Green LA |
| 7 | 80th | OF Jermaine Dye KC |
| 8 | 89th | OF Lance Berkman Hou |
| 9 | 104th | SP Rick Helling Tex |
| 10 | 113th | C Ben Petrick Col |
| 11 | 128th | DH Andres Galarraga Tex |
| 12 | 137th | RP Bob Wickman Cle |
| 13 | 152nd | SP Dave Burba Cle |
| 14 | 161st | SP Pete Harnisch Cin |
| 15 | 176th | OF Carlos Lee ChA |
| 16 | 185th | SP Woody Williams SD |
| 17 | 200th | SP Kenny Rogers Tex |
| 18 | 209th | SS Neifi Perez Col |
| 19 | 224th | SP Osvaldo Fernandez Cin |
| 20 | 233rd | OF Matt Lawton Ret |
| 21 | 248th | SP Pedro Astacio Col |
| 22 | 257th | SP Paul Wilson TB |
| 23 | 272nd | SP Jamie Moyer Sea |
| 24 | 281st | SP Rob Bell Cin |
| 25 | 296th | SP Jarrod Washburn Ana |
| 26 | 305th | 3B Craig Paquette StL |
| 27 | 320th | 2B Bret Boone Sea |
| 28 | 329th | SS Alex Gonzalez Tor |
| 29 | 344th | SP Albie Lopez TB |