| Round | Overall | Player |
|---|---|---|
| 1 | 9th | 1B Carlos Delgado Tor |
| 2 | 16th | 3B Troy Glaus Ana |
| 3 | 33rd | SP Tim Hudson Oak |
| 4 | 40th | OF Bernie Williams NYA |
| 5 | 57th | SP Tom Glavine Atl |
| 6 | 64th | SP Curt Schilling Ari |
| 7 | 81st | OF Shawn Green LA |
| 8 | 88th | C Charles Johnson Fla |
| 9 | 105th | SS Omar Vizquel Cle |
| 10 | 112th | SP Mike Hampton Col |
| 11 | 129th | OF David Justice NYA |
| 12 | 136th | RP Curt Leskanic Mil |
| 13 | 153rd | OF Ben Grieve TB |
| 14 | 160th | 2B Jose Ortiz Oak |
| 15 | 177th | SP Shawn Estes SF |
| 16 | 184th | 1B Tony Clark Det |
| 17 | 201st | 3B Alfonso Soriano NYA |
| 18 | 208th | RP Jeff Brantley Tex |
| 19 | 225th | SP Gil Heredia Oak |
| 20 | 232nd | OF Terrence Long Oak |
| 21 | 249th | C Bobby Estalella SF |
| 22 | 256th | OF Brian Jordan Atl |
| 23 | 273rd | OF Rusty Greer Tex |
| 24 | 280th | 3B Sean Burroughs SD |
| 25 | 297th | SP Blake Stein KC |
| 26 | 304th | SP Kent Bottenfield Hou |
| 27 | 321st | RP Rod Beck Bos |
| 28 | 328th | SS Pat Meares Pit |
| 29 | 345th | OF Paul O'Neill NYA |