| Week | Add | Drop |
| Week 1 |
P Jason Bere  |
OF Cliff Floyd |
| Week 3 |
P Tyler Green  |
P Darren Oliver  |
| Week 5 |
P Rolando Arrojo  |
OF Jon Nunnally  |
| Week 9 |
OF Garret Anderson |
P Jack McDowell |
| Week 10 |
OF Jeffrey Hammonds  |
1B Derrek Lee |
| Week 11 |
P Matt Morris  |
1B Paul Sorrento |
| Week 12 |
P Billy Taylor  |
P Jason Bere |
| Week 16 |
OF Mark Whiten  |
OF Jeffrey Hammonds |
| Week 18 |
OF Phil Nevin |
P Tyler Green |
| 1st Team | 2nd Team |
| Week 9 | |
| Bayou Bums | Alabama Slammers |
OF
Ken Griffey Jr
 P Dave Burba SS Alex Gonzalez  |
SS
Barry Larkin
P Randy Johnson P Jose Lima  |
| Week 12 | |
| Bayou Bums | Westmont Wildcats |
P
Bret Saberhagen
 OF Dante Bichette  |
DH
Paul Molitor
 P Kevin Brown  |